extractTrait(Taxa taxa, String sep, Integer i, String name)

return a trait alignment, which contains the set of traits extracted from taxa names.

Parameters

  • Taxa taxa - the set of taxa whose names contain the traits.
  • String sep - the substring to split the taxa names, where Java regular expression escape characters will be given no special meaning.
  • Integer i - i (>=0) is the index to extract the trait value.
  • String name - (optional) the map containing optional arguments and their values for reuse.

Return type

Alignment

Examples

  • covidDPG.lphy
  • https://linguaphylo.github.io/tutorials/discrete-phylogeography/